Survival-associated meQTLs across different cancer types


We identified 23,432 meQTLs associated with patient overall survival across different cancer types at FDR < 0.05.


e.g., "BLCA"
e.g., "rs11600543"


Cancer type
SNP ID
SNP position (hg19)
Alleles (A/a)
log-rank test p-value
Sample size
Median survival time AA
Median survival time Aa
Median survival time aa
Dispaly
THYM rs850027 chr7:29675792 G/T 3.82E-13 119 38.33 45.87 6 KM Plot
THYM rs850029 chr7:29678087 A/G 3.95E-13 119 38.13 46.27 6 KM Plot
THYM rs874484 chr16:24803242 T/C 3.67E-6 118 48 28 31.37 KM Plot
THYM rs88520 chr6:117181666 C/A 4.73E-5 118 38.33 50.28 19.03 KM Plot
THYM rs891781 chr12:121618438 A/G 1.85E-5 119 24.87 45.87 48 KM Plot
THYM rs892649 chr9:98516612 T/C 3.94E-6 116 37.98 51.23 32.7 KM Plot
THYM rs918430 chr19:29285352 T/C 6.64E-6 115 48 33.67 22.9 KM Plot
THYM rs924762 chr3:147223899 C/T 2.37E-5 115 48 35 25.83 KM Plot
THYM rs928111 chr13:111016886 A/C 0.000214 119 38.13 46.27 55.1 KM Plot
THYM rs929332 chr7:45334142 C/T 2.37E-5 119 49.6 35.4 14.9 KM Plot
THYM rs9309681 chr2:30787146 C/T 1.91E-8 117 36.4 50.1 33.13 KM Plot
THYM rs9316478 chr13:50412506 A/T 4.49E-5 119 36.77 49.75 73.7 KM Plot
THYM rs9328155 chr6:3267615 C/G 0 118 4.13 44.3 38.33 KM Plot
THYM rs9328156 chr6:3267618 T/C 0 118 4.13 44.3 38.33 KM Plot
THYM rs9328157 chr6:3267710 T/C 0 118 4.13 44.3 38.33 KM Plot